CellProfiler
Posted on 30 January 2019
CellProfiler is a free open-source cell image analysis software. It is designed to assist researchers without training in programming or computer vision to design analysis pipelines to automatically measure features from thousands of images.
Type of tool: Image analysis software
Resource Created By: Carpenter Lab, Broad Institute
Is this tool open source?: Yes
You may also be interested in
SynapseNet: Deep Learning for Automatic Synapse Reconstruction
automatic synapse reconstruction and analysis in EM
Sarah Muth, Frederieke Moschref, Luca Freckmann, Sophia Mutschall, Ines Hojas-Garcia-Plaza, Julius N. Bahr, Arsen Petrovic, Thanh Thao Do, Valentin Schwarze, Anwai Archit, Kirsten Weyand, Susann Michanski, Lydia Maus, Cordelia Imig, Nils Brose, Carolin Wichmann, Ruben Fernandez-Busnadiego, Tobias Moser, Silvio O. Rizzoli, Benjamin H. Cooper, Constantin Pape
Open Source 3D Printed Microscope
PUMA 3D Printed Microscope
Dr Paul J. Tadrous
Fiji
ImageJ bundled with a lot of plugins
Curtis Rueden & the ImageJ development team at LOCI, U. Wisconsin-Madison
