Advertisement

CellProfiler

Posted on 30 January 2019

CellProfiler is a free open-source cell image analysis software. It is designed to assist researchers without training in programming or computer vision to design analysis pipelines to automatically measure features from thousands of images.

Type of tool: Image analysis software

Resource Created By: Carpenter Lab, Broad Institute

Website

Is this tool open source?: Yes

You may also be interested in

symbol for thumbnail

The Microscopy and Microanalysis Facility Resource List

Resource list from a core at U of New Brunswick

Microscopy and Microanalysis Facility

symbol for thumbnail

EMPIAR

Image archive for 3D EM datasets

symbol for thumbnail

SynapseNet: Deep Learning for Automatic Synapse Reconstruction

automatic synapse reconstruction and analysis in EM

Sarah Muth, Frederieke Moschref, Luca Freckmann, Sophia Mutschall, Ines Hojas-Garcia-Plaza, Julius N. Bahr, Arsen Petrovic, Thanh Thao Do, Valentin Schwarze, Anwai Archit, Kirsten Weyand, Susann Michanski, Lydia Maus, Cordelia Imig, Nils Brose, Carolin Wichmann, Ruben Fernandez-Busnadiego, Tobias Moser, Silvio O. Rizzoli, Benjamin H. Cooper, Constantin Pape