Advertisement

CellOrganizer

Posted on 23 February 2019

CellOrganizer can construct generative models of the organization of cells from images and can generate synthetic images or movies of cells from the generative model. These models, which are an ‘average’ description of a cell phenotype, can be used to integrate hypotheses. These models can be stored and retrieved. CellOrganizer can learn models of cell shape; nuclear shape; vesicular organelle size, shape and position; microtubule distribution; and average protein distributions.

Resource Created By: Murphy Lab, Carnegie Mellon

Website

Is this tool open source?: Yes

Type of tool:

You may also be interested in

symbol for thumbnail

QuPath

software for whole slide image analysis

Pete Bankhead and Jose Fernandez

symbol for thumbnail

pyLattice

Python library for lattice light-sheet image analysis

Johannes Schöneberg

symbol for thumbnail

Mesmerize: A highly versatile platform for calcium imaging analysis

Platform for Calcium imaging analysis

Kushal Kolar, Daniel Dondorp, Marios Chatzigeorgiou