CellOrganizer

CellOrganizer can construct generative models of the organization of cells from images and can generate synthetic images or movies of cells from the generative model. These models, which are an ‘average’ description of a cell phenotype, can be used to integrate hypotheses. These models can be stored and retrieved. CellOrganizer can learn models of cell shape; nuclear shape; vesicular organelle size, shape and position; microtubule distribution; and average protein distributions.