BigStitcher
Posted on 7 August 2019
A software package, implemented in ImageJ, to stitch together multi-tile and multi-view datasets acquired by light sheet, confocal and widefield microscopy. Users can interact with images through the alignment process or BigStitcher can process images automatically. ‘How to’ videos are available here: https://www.youtube.com/playlist?list=PLNZz8lLDpAeVOeAmQWMrKGOeB3vv28yJE
Created by Preibisch Lab
Type of tool: Image analysis software
Resource Created By: Preibisch Lab
Is this tool open source?: Yes
You may also be interested in
Segment Anything for Microscopy
Vision Foundation Models for Bio-Image Segmentation
Anwai Archit, Luca Freckmann, Sushmita Nair, Nabeel Khalid, Paul Hilt, Vikas Rajashekhar, Marei Freitag, Carolin Teuber, Genevieve Buckley, Sebastian von Haaren, Sagnik Gupta, Andreas Dengel, Sheraz Ahmed, Constantin Pape
Microscopy Image Browser
MATLAB-based tool for advanced image processing
Ilya Belevich, Merja Joensuu, Darshan Kumar, Helena Vihinen and Eija Jokitalo
SuRVoS Workbench
Super Region Volume Segmentation
Diamond Light Source & The University of Nottingham.