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BigStitcher

Posted on 7 August 2019

A software package, implemented in ImageJ, to stitch together multi-tile and multi-view datasets acquired by light sheet, confocal and widefield microscopy. Users can interact with images through the alignment process or BigStitcher can process images automatically. ‘How to’ videos are available here: https://www.youtube.com/playlist?list=PLNZz8lLDpAeVOeAmQWMrKGOeB3vv28yJE

Created by Preibisch Lab

Type of tool: Image analysis software

Website

Resource Created By: Preibisch Lab

Is this tool open source?: Yes

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