BigStitcher
Posted on 7 August 2019
A software package, implemented in ImageJ, to stitch together multi-tile and multi-view datasets acquired by light sheet, confocal and widefield microscopy. Users can interact with images through the alignment process or BigStitcher can process images automatically. ‘How to’ videos are available here: https://www.youtube.com/playlist?list=PLNZz8lLDpAeVOeAmQWMrKGOeB3vv28yJE
Created by Preibisch Lab
Type of tool: Image analysis software
Resource Created By: Preibisch Lab
Is this tool open source?: Yes
You may also be interested in

TIFFFolder
Access a subset of data from a folder of TIFFs
Talley Lambert, Harvard Medical School

Segment Anything for Microscopy
Vision Foundation Models for Bio-Image Segmentation
Anwai Archit, Luca Freckmann, Sushmita Nair, Nabeel Khalid, Paul Hilt, Vikas Rajashekhar, Marei Freitag, Carolin Teuber, Genevieve Buckley, Sebastian von Haaren, Sagnik Gupta, Andreas Dengel, Sheraz Ahmed, Constantin Pape

Bioimage Informatics Index
An extensive database of image analysis tools
NEUBIAS