CellCognition
Posted on 19 September 2019
Free and open-source software for the analysis of high content screens collecting live cell imaging data. CellCognition can be used to segment cells and organelles, describe cellular morphology, annotate and classify phenotypes, and for tracking. It was initially developed for quantitative phenotypic profiling of mitosis and can also be used to analyse other dynamic processes.
Type of tool: Image analysis software
Resource Created By: Gerlich & Langer
Is this tool open source?: Yes
You may also be interested in
Allen Intitute YouTube playlist on ExA-SPIM
Videos on ExA-SPIM from the Allen Institute
Allen Institute
Danuser Lab Software
Several different software packages available
Danuser Lab, UTSW
CellProfiler
For measuring and analyzing cell images
Carpenter Lab, Broad Institute