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Lea Kabjesz

Hi! My name is Lea. I’m a bioinformatician by training and currently working as a research assistant with Robert Haase at ScaDS.AI, Leipzig. As part of the NFDI4BioImage project, I’m passionate about addressing the day-to-day challenges life scientists face when working with imaging data. My goal is to support the community in this field - whether through developing practical tools or creating training materials. Feel free to reach out or connect!

About Lea Kabjesz

Scientific field: Computational biology

Microscopy background: Image Analysis

Posts by Lea Kabjesz

OMERO Outputs: Insights from the 4th BioHackathon 2025

Posted by , on 17 December 2025

Hi all! Today I would like to share my experience participating in my first BioHackathon and point you to some new exciting features coming soon to the bioimaging software OMERO. If you are interested in participating in a hackathon yourself, but don’t know what to expect or where to start, I have prepared some insights

Annotating Images in Cellpose

Posted by , on 5 June 2025

In this blog post, I’ll show you how to manually annotate cells in 2D and 3D images using the Cellpose Graphical User Interface (GUI). Manual annotation is a key step in many bioimage analysis workflows. It allows you to create labeled data that can serve as a reference for evaluating segmentation quality – or even