Advertisement

BigStitcher

Posted on 7 August 2019

A software package, implemented in ImageJ, to stitch together multi-tile and multi-view datasets acquired by light sheet, confocal and widefield microscopy. Users can interact with images through the alignment process or BigStitcher can process images automatically. ‘How to’ videos are available here: https://www.youtube.com/playlist?list=PLNZz8lLDpAeVOeAmQWMrKGOeB3vv28yJE

Created by Preibisch Lab

Type of tool: Image analysis software

Website

Resource Created By: Preibisch Lab

Is this tool open source?: Yes

You may also be interested in

symbol for thumbnail

Mesmerize: A highly versatile platform for calcium imaging analysis

Platform for Calcium imaging analysis

Kushal Kolar, Daniel Dondorp, Marios Chatzigeorgiou

symbol for thumbnail

CellProfiler

For measuring and analyzing cell images

Carpenter Lab, Broad Institute

symbol for thumbnail

Resource List from Microscopy Services Laboratory (MSL)

A list of teaching and learning microscopy resources

MSL UNC-Chapel Hill