Bio-image Analysis with Napari
Posted on 23 July 2024
‘How to’ guides for common bioimage analysis method by Mara Lampert. This blog series is published on FocalPlane and covers rescaling images, annotating 3D images, checking segmentation results, feature extraction, tracking and writing bug reports.
You may also be interested in
CLIJ2
GPU-accelerated image processing
Robert Haase, Loic Alain Royer, Peter Steinbach, Deborah Schmidt, Alexandr Dibrov, Uwe Schmidt, Martin Weigert, Nicola Maghelli, Pavel Tomancak, Florian Jug, Eugene W Myers
AIDAhisto
A tool optimised for quantification of histological staining of mouse brain tissue
Niklas Pallast and Markus Aswendt
SynapseNet: Deep Learning for Automatic Synapse Reconstruction
automatic synapse reconstruction and analysis in EM
Sarah Muth, Frederieke Moschref, Luca Freckmann, Sophia Mutschall, Ines Hojas-Garcia-Plaza, Julius N. Bahr, Arsen Petrovic, Thanh Thao Do, Valentin Schwarze, Anwai Archit, Kirsten Weyand, Susann Michanski, Lydia Maus, Cordelia Imig, Nils Brose, Carolin Wichmann, Ruben Fernandez-Busnadiego, Tobias Moser, Silvio O. Rizzoli, Benjamin H. Cooper, Constantin Pape