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Learning bioimage analysis resource list

Posted on 29 January 2019

A list of papers, websites, online books, videos and essential tools for getting started in bioimage analysis suggested by the Image Analysis Collaboratory at Harvard Medical School.

Type of tool: Image analysis software

Website

Is this tool open source?: Yes

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SuRVoS Workbench

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Diamond Light Source & The University of Nottingham.

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Ray Optics Simulation

Simulate reflection and refraction of light

Rick Tu

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Fiji

ImageJ bundled with a lot of plugins

Curtis Rueden & the ImageJ development team at LOCI, U. Wisconsin-Madison