Learning bioimage analysis resource list
Posted on 29 January 2019
A list of papers, websites, online books, videos and essential tools for getting started in bioimage analysis suggested by the Image Analysis Collaboratory at Harvard Medical School.
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LLSpy-SLM
Python app for creating SLM masks for light sheet
Talley Lambert, Harvard Medical School
MotilA: A Python pipeline for microglial fine process motility analysis in 3D time-lapse multiphoton microscopy data
Measures microglial process motility in 3D in vivo data
AIDAhisto
A tool optimised for quantification of histological staining of mouse brain tissue
Niklas Pallast and Markus Aswendt