Advertisement

μManager

Posted on 30 January 2019

μManager is an open-source software to control microscope hardware, including timelapse, z-stacks and multi-channel imaging. It is compatible with a wide range of commercial microscopes as well as most scientific-grade cameras and many peripherals (stages, filter wheels, shutters, etc.) It is hosted on GitHub and continues to be developed by software developers and users.

Type of tool: Image acquisition software

Resource Created By: Mark Tsuchida, Chris Weisiger & Nico Stuurman in the Vale Lab, UCSF

Website

Is this tool open source?: Yes

You may also be interested in

symbol for thumbnail

SynapseNet: Deep Learning for Automatic Synapse Reconstruction

automatic synapse reconstruction and analysis in EM

Sarah Muth, Frederieke Moschref, Luca Freckmann, Sophia Mutschall, Ines Hojas-Garcia-Plaza, Julius N. Bahr, Arsen Petrovic, Thanh Thao Do, Valentin Schwarze, Anwai Archit, Kirsten Weyand, Susann Michanski, Lydia Maus, Cordelia Imig, Nils Brose, Carolin Wichmann, Ruben Fernandez-Busnadiego, Tobias Moser, Silvio O. Rizzoli, Benjamin H. Cooper, Constantin Pape

symbol for thumbnail

CellProfiler

For measuring and analyzing cell images

Carpenter Lab, Broad Institute

symbol for thumbnail

CBIAS 2025 poster collection

Posters from CBIAS 2025

Crick BioImage Analysis Symposium