OpenOrganelle
Posted on 29 August 2024
OpenOrganelle is a database for volume EM datasets and accompanying segmentations, available for exploration. The ‘Organelle’ page shows the data arranged by segmented organelle and on the ‘Measurements’ page users can browse the surface area, volume or contact sites from the segmented organelles. Recently, the team have added a text search to improve browser experience. OpenOrganelle is hosted by HHMI Janelia Research Campus.
You may also be interested in
μManager
For control of automated microscopes
Mark Tsuchida, Chris Weisiger & Nico Stuurman in the Vale Lab, UCSF
SIMcheck
ImageJ tools for assessing SIM data quality
Micron Oxford
Microscopic Image Analyzer (MIA)
A software for deep learning based image analysis
Nils Körber