OpenOrganelle
Posted on 29 August 2024
OpenOrganelle is a database for volume EM datasets and accompanying segmentations, available for exploration. The ‘Organelle’ page shows the data arranged by segmented organelle and on the ‘Measurements’ page users can browse the surface area, volume or contact sites from the segmented organelles. Recently, the team have added a text search to improve browser experience. OpenOrganelle is hosted by HHMI Janelia Research Campus.
You may also be interested in

CellOrganizer
Model learning tools
Murphy Lab, Carnegie Mellon

Allen Intitute YouTube playlist on ExA-SPIM
Videos on ExA-SPIM from the Allen Institute
Allen Institute

OpenFlexure Microscope
an open-source 3D-printed microscope
R Bowman et al