Advertisement

AI in Microscopy: A BioImaging Guide

Posted on 27 August 2026

AI in Microscopy is an interactive online textbook intended to introduce biologists and microscopists to the fundamentals of artificial intelligence and machine learning.

The source code for this textbook is available on GitHub. All content is licensed under BSD 3-Clause, except where noted otherwise.

AI in Microscopy is currently under construction and some chapters are incomplete. This page will continue to be updated as the textbook progresses.

Website

Resource Created By: Editors: Teng-Leong Chew, Rachel Lee, Owen Puls at HHMI Janelia Research Campus

Learning material type:

You may also be interested in

symbol for thumbnail

Fundamentals of Light Microscopy & Electronic Imaging

A great textbook for beginners and teachers

Murphy & Davidson, 2012

symbol for thumbnail

Monash Advanced Microscopy Seminar Series

Lectures from the Monash Advanced Microscopy Series

Monash Micro Imaging Core Facility

symbol for thumbnail

Microcourses YouTube Channel

Short videos on microscopy fundamentals

JC Waters