OpenOrganelle
Posted on 29 August 2024
OpenOrganelle is a database for volume EM datasets and accompanying segmentations, available for exploration. The ‘Organelle’ page shows the data arranged by segmented organelle and on the ‘Measurements’ page users can browse the surface area, volume or contact sites from the segmented organelles. Recently, the team have added a text search to improve browser experience. OpenOrganelle is hosted by HHMI Janelia Research Campus.
You may also be interested in
ilastik
Interactive learning and segmentation toolkit
Anna Kreshuk's lab, EMBL
miCube Open Source Microscope
Plans to build your own fluorescence microscope
Hohlbein Lab
SpekCheck
For filterset optimisation
Micron Oxford