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'How they started with Euro-BioImaging & Global BioImaging (GBI) ?'

Posted by Mai Rahmoon, on 14 September 2023

As a continuation to the series of blogs called “how it started…”, where we shed light on the journey through the origins of various imaging communities around the world, we speak to Euro-BioImaging and GBI. Our mission for this series is simple yet powerful – by learning about the visions and goals of these communities,

‘How it (they) started with the Advanced Imaging Center (AIC)?’

Posted by Mai Rahmoon, on 21 July 2023

A series going behind the scenes to unveil the captivating origins of imaging communities and centers. I will unravel the stories that brought these hubs of innovation and discovery into existence. Behind every iconic center or community lies a tale of visionaries, pioneers, and passionate individuals who devoted their lives to pushing the boundaries of

Janelia+EMBL BioImaging Seminar Series: How We Started a Successful Seminar Series during the Pandemic

Posted by Ulrike Boehm, on 25 January 2022

How we started a global BioImaging seminar series in the middle of a global pandemic...

The story behind ZeroCostDL4Mic, or How to get started with using Deep Learning for your microscopy data

Posted by Romain Laine, on 18 January 2021

We all hear again and again about Deep Learning (DL), how great it is, how it’s going to revolutionise science, engineering, medicine and work. But where and how is this all happening? If you wonder how you could get started on thinking, let alone using DL on your microscopy data, look no further, we have

QuPath and scripting - why isn't it easier?

Posted by Laura Nicolas-Saenz, on 29 March 2024

As I explained in my previous post, this journey began because I needed to learn how to master QuPath. I turned it into a vlogging affair to be held accountable, help others, and use it to find common user problems. For the last six weeks I have explored all the ways QuPath can easily help

From Zero to QuPath Hero - A journey unveiled

Posted by Laura Nicolas-Saenz, on 22 March 2024

Laura, a postdoc researcher in biomedical image analysis and artificial intelligence, embarked on her journey with a dedication to improving image analysis tools after completing her PhD at Universidad Carlos III, Madrid. Joining the QuPath team in June 2023, she found an ideal environment to contribute her expertise and innovate in the field. Despite facing

An interview on the Traversing European Coastlines (TREC) project with Yannick Schwab

Posted by Helen Zenner, on 5 March 2024

Traversing European Coastlines (TREC) is a flagship project in the planetary biology theme from European Molecular Biology Laboratory (EMBL). A consortium of several research organisations under the lead of EMBL has embarked on an expedition to sample the biodiversity in the coastlines of Europe in 2023 and 2024. We caught up with Yannick Schwab, Team

An interview with Estibaliz Gómez de Mariscal

Posted by Helen Zenner, on 27 February 2024

At the end of 2023, DL4MicEverywhere was released. The platform aims to make deep learning methods in bioimage analysis more accessible and more reproducible. We caught up with Estibaliz Gómez de Mariscal (Esti), one of the co-leads of the project, to find out more about the platform, and to chat about Esti’s career so far

Announcing the 2024 FocalPlane correspondents

Posted by FocalPlane, on 1 February 2024

We are delighted to announce that we are continuing our FocalPlane correspondent programme and in 2024 we will be working with Daniel Doucet, Subhajit Dutta and Greg Redpath. They will benefit from a programme of writing groups, webinars and workshops coordinated by the in-house team at The Company of Biologists and will produce approximately six

Time-resolved confocal fluorescence microscopy from PicoQuant

Sponsored by PicoQuant, on 31 January 2024

On January 11th Professor Samrat Mukhopadhyay shared insights into the complicated behavior of the FUS low-complexity domain during liquid-liquid phase separation. He and his team study protein dynamics at the single molecule level with Fluorescence Correlation Spectroscopy (FCS), single-molecule FRET (smFRET), and anisotropy to gain a comprehensive understanding. His excellent presentation sparked great interest: All

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Microscopy-related articles from our journals

HCR spectral imaging: 10-plex, quantitative, high-resolution RNA and protein imaging in highly autofluorescent samples Development 2024 151: dev202307
filoVision – using deep learning and tip markers to automate filopodia analysis J Cell Sci 2024 137: jcs261274
C omputational tools for quantifying actin filament numbers, lengths, and bundling Biology Open 2024 13: bio.060267

Microscopy-related preprint highlights

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