Microscopy preprints – Bioimage analysis tools
Posted by FocalPlane, on 22 April 2022
Here is a curated selection of preprints published recently. In this post, we focus specifically on new bioimage analysis tools only.
CyberSco.py: open-source software for event-based, conditional microscopy
Lionel Chiron, Matthias LeBec, Celine Cordier, Sylvain Pouzet, Dimitrije Milunov, AlvaroBanderas, Jean-Marc di Meglio, Benoit Sorre, Pascal Hersen
![](https://focalplane.biologists.com/wp-content/uploads/2022/04/Screenshot-2022-04-20-164514.jpg)
LiveCellMiner: A New Tool to Analyze Mitotic Progression
Daniel Moreno-Andres, Anuk Bhattacharyya, Anja Scheufen, Johannes Stegmaier
![](https://focalplane.biologists.com/wp-content/uploads/2022/04/Screenshot-2022-04-20-164818-1024x215.jpg)
Ryan Conrad, Kedar Narayan
![](https://focalplane.biologists.com/wp-content/uploads/2022/04/Screenshot-2022-04-20-165042.jpg)
HiFENS: High-throughput FISH detection of endogenous pre-mRNA splicing isoforms
Asaf Shilo, Gianluca Pegoraro, Tom Misteli
![](https://focalplane.biologists.com/wp-content/uploads/2022/04/Screenshot-2022-04-20-165314.jpg)
Theo Aspert, Didier Hentsch, Gilles Charvin
![](https://focalplane.biologists.com/wp-content/uploads/2022/04/Screenshot-2022-04-20-170012-1024x284.jpg)
Figure extracted from Aspert et al.
Celine Trebeau, Jacques Boutet de Monvel, Gizem Altay, Jean-Yves Tinevez, Raphael Etournay
![](https://focalplane.biologists.com/wp-content/uploads/2022/04/Screenshot-2022-04-20-170559.jpg)
Ankit Gupta, Alan Sabirsh, Carolina Wahlby, Ida-Maria Sintorn
![](https://focalplane.biologists.com/wp-content/uploads/2022/04/Screenshot-2022-04-20-170841-1024x417.jpg)
Cellpose 2.0: how to train your own model
Carsen Stringer, Marius Pachitariu
![](https://focalplane.biologists.com/wp-content/uploads/2022/04/Screenshot-2022-04-20-171502-1024x738.jpg)
Abbas Habibalahi, Jared Campbell, Saabah Mahbub, Ayad Anwer, Long Nguyen, Anthony Gill, Muh Wong, Angela Chou, Carol Pollock, Sonia Saad, Ewa Goldys
![](https://focalplane.biologists.com/wp-content/uploads/2022/04/Screenshot-2022-04-21-081821.jpg)
Hanyi Yu, Fusheng Wang, George Theodoro, John Nickerson, Jun Kong
![](https://focalplane.biologists.com/wp-content/uploads/2022/04/Screenshot-2022-04-21-082217-1024x788.jpg)