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FocalPlane features... returns next week

Posted by FocalPlane, on 7 February 2022

Join us for our monthly webinar on Wednesday 16 February at 16:00 GMT to learn more about Machine Learning with Ricardo Henriques, Estibaliz Gómez de Mariscal and Martin Weigert. The talks will be hosted in Zoom. Following the Q&A, there will be a round table discussion with the speakers and input from the public. Register

News digest

Posted by FocalPlane, on 4 February 2022

Here is a selection of interesting news, publications and discussions related to microscopy that happened in the last two weeks. Thank you to our ‘FocalPlane reporters’ Martin Jones and Parash Prasad who helped us create this list. Twitter Microscopes and imaging tools: Squidpy for spatial-omics, bringing together images analysis and omics https://twitter.com/fabian_theis/… Combining micro-manager and

Funding opportunity for your next collaborative visit to another lab

Posted by FocalPlane, on 2 February 2022

Scientific collaborations are often key to the success of a project, providing more creative thinking and access to scientific expertise and equipment. For early-career researchers, these collaborations can be even more important, offering a unique opportunity for networking and self-promotion which can lead to fruitful collaborations and other opportunities in the future. The Travelling Fellowships

FocalPlane features... CLEM

Posted by FocalPlane, on 31 January 2022

In case you missed ‘FocalPlane features…’ this month, here is the recording of the webinar given by Yannick Schwab (EMBL Heidelberg), Ori Avinoam (Weizmann Institute of Science) and Alexandra Pacureanu (ESRF The European Synchrotron) on Monday 17 January 2022.

Microscopy preprints – Bioimage analysis tools

Posted by FocalPlane, on 28 January 2022

Here is a curated selection of preprints published recently. In this post, we focus specifically on new bioimage analysis tools only. 3D quantification of zebrafish cerebrovascular architecture by automated image analysis of light sheet fluorescence microscopy datasets. E. C. Kugler, J. Frost, V. Silva, K. Plant, K. Chhabria, T. J.A. Chico, P. A. Armitage Analysis

Janelia+EMBL BioImaging Seminar Series: How We Started a Successful Seminar Series during the Pandemic

Posted by Ulrike Boehm, on 25 January 2022

How we started a global BioImaging seminar series in the middle of a global pandemic...

News digest

Posted by FocalPlane, on 21 January 2022

Here is a selection of interesting news, publications and discussions related to microscopy that happened in the last two weeks. Thank you to our ‘FocalPlane reporter’ Martin Jones who helped us create this list. Twitter Microscopes and imaging tools: Cryo-Expansion microscopy (Cryo-ExM) published in Nature Methods https://twitter.com/MarineLaporte8/… New quantitative biosensors that work in live animals https://twitter.com/AndrewGYork/…

Microscopy preprints – applications in cell biology and more

Posted by FocalPlane, on 14 January 2022

Here is a curated selection of preprints published recently. In this post, we focus specifically on preprints using microscopy tools in different fields such as cell biology, plant biology, microbiology, and neuroscience. Nanoscale details of mitochondrial fission revealed by cryo-electron tomography. Shrawan Kumar Mageswaran, Danielle Ann Grotjahn, Xiangrui Zeng, Benjamin Asher Barad, Michaela A Medina,

FocalPlane features... returns next week

Posted by FocalPlane, on 12 January 2022

Join us for our first FocalPlane features… webinar of 2022 on Monday 17 January to learn more about Correlative Light Electron Microscopy (CLEM) with Yannick Schwab, Ori Avinoam, and Alexandra Pacureanu. The talks will be hosted in Remo, our browser-based conferencing platform. Following the Q&A session we will host a more informal session especially designed

News digest

Posted by FocalPlane, on 7 January 2022

Here is a selection of interesting news, publications and discussions related to microscopy that happened in the last two weeks. Thank you to our ‘FocalPlane reporters’ Martin Jones and Andrey Andreev who helped us create this list. Twitter Microscopes and imaging tools: Temperature-sensitive optogenetic tools https://twitter.com/BugajLab/… Foldscope now has a TIRF adaptor https://twitter.com/PrakashLab/… Confocal vs

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Microscopy-related articles from our journals

Toggle-Untoggle – a cell segmentation tool with an interactive user verification interface J Cell Sci 2025 138: jcs264154
The ratio of Wnt signaling activity to Sox2 transcription factor levels predicts neuromesodermal fate potential Development 2025 152: dev204661
The short isoform of Tango1 is dispensable for zebrafish survival but is required for skeletal patterning and integrity Biology Open 2025 14: bio062117

Microscopy-related preprint highlights

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