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Displaying posts with the tag: is_archive

Need Deep Learning support for your image analysis project?

Posted by , on 5 February 2024

The Second AI4Life Open Call, tailored to offer Deep Learning support to life scientists dealing with image analysis challenges, is open.

behind DeXtrusion: an automated pipeline to detect epithelial cell extrusion through machine learning

Posted by , on 6 October 2023

The problem In animals, epithelial tissue covers most of our organs. In order to create the very intricate and complex shapes of these organs, these tissues are drastically remodelled during embryogenesis through growth and shape changes. Once they achieve these final shapes, they maintain their cell number in a dynamic equilibrium. Both of these mechanisms,

Light Microscopy Specialist at Virginia Tech

Posted by , on 21 September 2023

The Fralin Life Sciences Institute (FLSI) at Virginia Tech is looking for a highly motivated individual to lead the development of a light microscopy imaging core facility, serve as its manager, and support research groups with microscopy needs on Virginia Tech’s Blacksburg campus. Application review will start on Oct 13th. The Light Microscopy Specialist will

PoLBIAS23 - Event Reflections and Revelations

Posted by , on 8 September 2023

Reflections and Revelations: Highlights from #PoLBIAS23 - A Symposium on Bioimage Analysis. This blog showcases a summary, as well as a reflection on open questions and community efforts,.

Tracking in napari

Posted by , on 1 June 2023

In this blog post we are exploring cell tracking in napari. Two important processes in normal tissue development and disease are cell migration and proliferation. To gain a better understanding on these processes, tracking in time-lapse datasets is needed. By measuring track properties, like velocity and the total travelled distance, spatio-temporal relationships can be studied.

#GliaMorph - a tool to analyse glial cell morphology in 3D

Posted by , on 17 May 2022

Contents What is #GliaMorph? What can you do and analyse with #GliaMorph? Links to manuscripts and data Contributions and Feedback Thanks to all contributors and people providing feedback References What is GliaMorph? GliaMorph is a toolkit implemented as Fiji Macros to allow modular application to process and analyse Müller glia morphology in the retina. During

Job Opportunity: Light Microscopy and Image analysis at the Centre for Cellular Imaging of Gothenburg University

Posted by , on 4 February 2022

We are looking for a new colleague to join the light microscopy team of the Centre for Cellular Imaging of Gothenburg University (CCI). Information below and in this link Researcher, Core Facilities The University of Gothenburg tackles society’s challenges with diverse knowledge. 53 500 students and 6 500 employees make the university a large and inspiring place

Janelia+EMBL BioImaging Seminar Series: How We Started a Successful Seminar Series during the Pandemic

Posted by , on 25 January 2022

How we started a global BioImaging seminar series in the middle of a global pandemic...

DeepImageJ: Deep learning in bioimage analysis for dummies

Posted by , on 2 December 2021

Written by Estibaliz Gómez-de-Mariscal, Cristina de-la-Torre-Gutiérrez, Arrate Muñoz-Barrutia, and Daniel Sage Do you invest significant time looking for tools to analyze your microscopy images? Probably you have already heard about the extraordinary capabilities of deep learning (DL) to reveal complex visual structures in images. If you are a biologist practicing daily ImageJ, you may look

Postdoctoral Research Associate, Imaging Network, University of Münster (Germany)

Posted by , on 5 May 2021

The Microscopy Unit of the Imaging Network at the University of Münster, Germany, is seeking to fill the position of a Postdoctoral Research AssociateWissenschaftliche/r Mitarbeiter/in(salary level TV-L E 13, 100%) from 1 June 2021. We are offering a fixed-term full-time position for 5 years. Full-time employees are required to teach 4 hours per week during