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Microscopy preprints - New tools and techniques

Posted by FocalPlane, on 31 December 2021

Here is a curated selection of preprints published recently. In this post, we focus specifically on new imaging tools only. Miniscope-LFOV: A large field of view, single cell resolution, miniature microscope for wired and wire-free imaging of neural dynamics in freely behaving animals. Changliang Guo, Garrett J. Blair, Megha Sehgal, Federico N. Sangiuliano Jimka, Arash

Microscopy preprints - Bioimage analysis tools

Posted by FocalPlane, on 17 December 2021

Here is a curated selection of preprints published recently. In this post, we focus specifically on new bioimage analysis tools only. Robust and unbiased estimation of the background distribution for automated quantitative imaging. Mauro Silberberg, Hernán E. Grecco Real-time Image Denoising of Mixed Poisson-Gaussian Noise in Fluorescence Microscopy Images using ImageJ. Varun Mannam, Yide Zhang,

Microscopy preprints - applications in cell biology and more

Posted by FocalPlane, on 3 December 2021

Here is a curated selection of preprints published recently. In this post, we focus specifically on preprints using microscopy tools in different fields such as cell biology, neuroscience, and immunology. Actin filaments act as a size-dependent diffusion barrier around centrosomes. Hsuan Cheng, Yu-Lin Kao, Lohitaksh Sharma, Wen-Ting Yang, Shih-Han Huang, Hong-Rui Lin, Yao-Shen Huang, Chi-Ling

Microscopy preprints - New tools and techniques

Posted by FocalPlane, on 19 November 2021

Here is a curated selection of preprints published recently. In this post, we focus specifically on new imaging tools only. Open microscopy in the life sciences: Quo Vadis? Johannes Hohlbein, Benedict Diederich, Barbora Marsikova, Emmanuel G. Reynaud, Seamus Holden, Wiebke Jahr, Robert Haase, Kirti Prakash Development of an Ontology for an Integrated Image Analysis Platform

Microscopy preprints - Bioimage analysis tools

Posted by FocalPlane, on 5 November 2021

Here is a curated selection of preprints published recently. In this post, we focus specifically on new bioimage analysis tools only. 2020 BioImage Analysis Survey: Community experiences and needs for the future. Nasim Jamali, Ellen TA Dobson, Kevin W. Eliceiri, Anne E. Carpenter, Beth A. Cimini Cell-ACDC: a user-friendly toolset embedding state-of-the-art neural networks for

Microscopy preprints - applications in cell biology and more

Posted by FocalPlane, on 22 October 2021

Here is a curated selection of preprints published recently. In this post, we focus specifically on preprints using microscopy tools in different fields such as cell biology, neuroscience, and development. These two preprints were selected by Pablo J. Sáez who also participated in our Hot Reads post this month: An anti-inflammatory activation sequence governs macrophage

Microscopy preprints - New tools and techniques

Posted by FocalPlane, on 8 October 2021

Here is a curated selection of preprints published recently. In this post, we focus specifically on new imaging tools only. Preprint selected by Pablo J. Sáez who also participated in our Hot Reads post this month: A turquoise fluorescence lifetime-based biosensor for quantitative imaging of intracellular calcium. Franka H. van der Linden, Eike K. Mahlandt,

Epithelial Mechanics Fan Club

Posted by FocalPlane, on 4 December 2025

In this post, Nimesh Chahare and Julia Eckert tell us about the 'Epithelial Mechanics Fan Club'. You can follow the club on Bluesky, X, and now on their new website. Reach out to Nimesh and Julia if you would like to contribute.

FocalPlane features... preLights recording

Posted by FocalPlane, on 25 September 2025

In our FocalPlane features... preLights webinar, Felipe Del Valle Batalla and Vibha Singh presented live preLights highlighting preprinted research from Carmen Rodilla-Ramírez, Francesca Bottanelli and colleagues on the link between T-cell protrusions and CAR signalling, and from Eva Mejía-Ramírez, Carolina Florian and colleagues on the role of RhoA in stem cell ageing

FocalPlane features... meets preLights

Posted by FocalPlane, on 20 August 2025

For our second collaborative FocalPlane features… webinar we have teamed up with preLights, our sister community site. This webinar will be hosted by Felipe Del Valle Batalla (University of Edinburgh, UK) and Vibha Singh (Princess Margaret Cancer Research Tower (UHN), Canada), two members of the preLights community (known as preLighters), who have selected two recent

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Microscopy-related articles from our journals

Toggle-Untoggle – a cell segmentation tool with an interactive user verification interface J Cell Sci 2025 138: jcs264154
The ratio of Wnt signaling activity to Sox2 transcription factor levels predicts neuromesodermal fate potential Development 2025 152: dev204661
The short isoform of Tango1 is dispensable for zebrafish survival but is required for skeletal patterning and integrity Biology Open 2025 14: bio062117

Microscopy-related preprint highlights

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