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Microscopy preprints - Bioimage analysis tools

Posted by FocalPlane, on 22 April 2022

Here is a curated selection of preprints published recently. In this post, we focus specifically on new bioimage analysis tools only. CyberSco.py: open-source software for event-based, conditional microscopy Lionel Chiron, Matthias LeBec, Celine Cordier, Sylvain Pouzet, Dimitrije Milunov, AlvaroBanderas, Jean-Marc di Meglio, Benoit Sorre, Pascal Hersen LiveCellMiner: A New Tool to Analyze Mitotic Progression Daniel

A new Review in Journal of Cell Science discusses how specimens can impact image acquisition

Posted by Helen Robertson, on 13 April 2022

With the development of new imaging strategies and technologies and advanced computational analyses has come a body of literature addressing various aspects of optimising imaging and processing. However, the impact of the sample itself on the quality of the image attained has garnered less exploration. Fluorescent microscopy is dependant on two factors – the intensity

Microscopy preprints – applications in cell biology and more

Posted by FocalPlane, on 8 April 2022

Here is a curated selection of preprints published recently. In this post, we focus specifically on preprints using microscopy tools in different fields such as cell biology, plant biology, microbiology, and neuroscience. Three-dimensional cilia structures from animals’ closest unicellular relatives, the Choanoflagellates Justine M. Pinskey, Adhya Lagisetty, Long Gui, Nhan Phan, Evan Reetz, Gang Fu,

Interim Director of Microscopy, University of Richmond (Virginia, USA)

Posted by Omar Quintero, on 31 August 2021

The Department of Biology at the University of Richmond invites applications for a full-time position as Interim Director of Microscopy and Imaging to begin in January of 2022. This is a 12-month term appointment, annually renewable for up to three years. The University is committed to supporting the essential role of microscopy and imaging across

News digest

Posted by FocalPlane, on 19 August 2021

Here is a selection of interesting news, publications and discussions related to microscopy that happened in the past month. Thank you to our ‘FocalPlane reporters’ – Martin Jones, Manish Kumar, Andrey Andreev and Parash Prasad – who helped us create this list. Twitter Microscopes and imaging tools: Large volume deep brain imaging https://twitter.com/RetoPaul/… RAPID, a

News digest

Posted by FocalPlane, on 27 July 2021

Here is a selection of interesting news, publications and discussions related to microscopy that happened in the past month. Thank you to our ‘FocalPlane reporters’: Martin Jones, Manish Kumar, Andrey Andreev and Parash Prasad who helped us create this list. Twitter Microscopes and imaging tools: Realising design flaws are unpleasant, but save a lot of

FocalPlane Image Competition

Posted by FocalPlane, on 19 July 2021

FocalPlane turned one on Thursday 1 July 2021, and we are organising a new image competition to celebrate it with you. Submit your favourite images acquired using any microscopy modality. All the images submitted will be featured on FocalPlane and will be voted on by the community. The image with the most votes will be

Andor and Akoya Biosciences to Collaborate in Spatial Omics market

FocalPlane 1-year Anniversary Image Competition

Posted by FocalPlane, on 1 July 2021

FocalPlane turns one today, Thursday 1 July 2021, and we would like to celebrate it with you all by organising a new image competition. Submit your favourite images acquired using any microscopy modality. All the images submitted will be featured on FocalPlane and will be voted on by the community. The image with the most

FocalPlane turns 1: goody bag give-aways

Posted by FocalPlane, on 1 July 2021

We are doing some goody bag give-aways for both new and existing FocalPlane users. If you’re already registered on FocalPlane, check your email later today to see if you’re the lucky winner. For new FocalPlane users, you still have the chance to win a goody bag. Just register before Thursday 8 July.

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Microscopy-related articles from our journals

HCR spectral imaging: 10-plex, quantitative, high-resolution RNA and protein imaging in highly autofluorescent samples Development 2024 151: dev202307
filoVision – using deep learning and tip markers to automate filopodia analysis J Cell Sci 2024 137: jcs261274
C omputational tools for quantifying actin filament numbers, lengths, and bundling Biology Open 2024 13: bio.060267

Microscopy-related preprint highlights

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